Yes that is correct, the same top level folders that I selected on the settings page to include in the calculate/move.
Actually, I need to put a caveat on this. It only worked to move the files for the folder I created. Do you have to create the top level folders onto each destination drive? I'd prefer it to move everything from the source disk to the target disk, regardless of what folders may or may not exist on target. In my case as stated, the target was a new empty drive. I'll now go create the rest of the top level folders and I expect the rest of the source disk files to move. Not ideal though.
Edit: Awesome plugin by the way, very polished, works and looks great. Just the one small issue with it not creating the top level folders.
Thanks for the comments GoChris !
rsync _should_ recreate the structure on the destination disk.
The folders you created, were the top-level shares from your source disk ?
Weird, looks like my reply got lost, I'll edit it in here. Yes it was the top level share folders, the same folders I selected to move from the settings page.