If it's an issue for the container itself adding them back in, then you can post in the applicable support thread for the app to have them modify the template accordingly to avoid this behaviour (there is a way for them to not have this happen)
@Squid Any chance you could detail the changes that must be made to the templates to avoid ports to be re-added on update? Is it only to set the required field to false? Thanks!
Applying update to Docker container readds removed template values
in General Support
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@Squid Any chance you could detail the changes that must be made to the templates to avoid ports to be re-added on update? Is it only to set the required field to false? Thanks!