DJFriar
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DJFriar's post in Unable to write to /config for *arr stack was marked as the answerI ended up self resolving this by forcing the new permissions on to the cache drive and the appdata share. After running it twice it finally updated both /mnt/user/appdata and /mnt/cache/appdata which were showing different permissions at first.
I also balanced and scrubbed the cache drive, and then re-configured the Docker apps from the existing templates.
Once I did all the above, they were able to work as expected again.