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One core pinned, Log full

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Sometime yesterday, I noticed that 1 core of my CPU was pinned. I realized this morning that my log file is full, as well. The specific core bounces around a bit - it will change to a different core at about 75%, then immediately climb to 100%.

image.png.d66fe8a8ceeb6704baef8f2c02cc19bd.png

I haven't a clue what's causing this, if someone can interpret the attached tea-leaves, I'd be most grateful.

nas-diagnostics-20200104-0912.zip

It's your dockers. Look at your ps or top reports.

 


top - 09:12:37 up 3 days, 22:43,  0 users,  load average: 2.45, 3.10, 2.79
Tasks: 422 total,   3 running, 418 sleeping,   0 stopped,   1 zombie
%Cpu(s): 59.1 us,  9.1 sy,  0.0 ni, 31.8 id,  0.0 wa,  0.0 hi,  0.0 si,  0.0 st
MiB Mem :  23047.5 total,    274.2 free,   6474.9 used,  16298.4 buff/cache
MiB Swap:      0.0 total,      0.0 free,      0.0 used.  15115.3 avail Mem 

  PID USER      PR  NI    VIRT    RES    SHR S  %CPU  %MEM     TIME+ COMMAND
23267 nobody    20   0 1651200 291500  28772 S 131.2   1.2   3:08.72 mono
22159 nobody    20   0   21.1g  90960  31256 S 106.2   0.4 313:56.59 EmbyStat
28177 root      20   0  904128 127168   1136 S  18.8   0.5 422:02.25 shfs
 6031 root      20   0  349140   4340   3540 S   6.2   0.0  29:31.27 emhttpd
22956 nobody    20   0   45080  35656   2780 S   6.2   0.2   0:40.92 nzbget
28699 nobody    20   0   62476  21568  18028 S   6.2   0.1 173:39.48 smbd
    1 root      20   0    2468   1840   1736 S   0.0   0.0   0:33.18 init
    2 root      20   0       0      0      0 S   0.0   0.0   0:00.16 kthreadd

That mono process is part of Radar.


root     22837  0.1  0.0 109104  7660 ?        Sl   03:36   0:39  |   \_ containerd-shim -namespace moby -workdir /var/lib/docker/containerd/daemon/io.containerd.runtime.v1.linux/moby/7c083e04685d42459fcac88f702479ce4a413bad7e348bf06085a0650e553bdd -address /var/run/docker/containerd/containerd.sock -containerd-binary /usr/bin/containerd -runtime-root /var/run/docker/runtime-runc
root     22876  0.0  0.0    204     4 ?        Ss   03:36   0:00  |   |   \_ s6-svscan -t0 /var/run/s6/services
root     23032  0.0  0.0    204     4 ?        S    03:36   0:00  |   |       \_ s6-supervise s6-fdholderd
root     23264  0.0  0.0    204     4 ?        S    03:36   0:00  |   |       \_ s6-supervise radarr
nobody   23267  0.9  1.2 1651200 291500 ?      Ssl  03:36   3:08  |   |           \_ mono --debug Radarr.exe -nobrowser -data=/config

The other docker container:

 


root     21735  0.1  0.0 109104  7808 ?        Sl   03:36   0:39  |   \_ containerd-shim -namespace moby -workdir /var/lib/docker/containerd/daemon/io.containerd.runtime.v1.linux/moby/9c63bc954f1929047bfefedca0d520e92dbb1ca7dfb2e3fc61a48792a4c26aa9 -address /var/run/docker/containerd/containerd.sock -containerd-binary /usr/bin/containerd -runtime-root /var/run/docker/runtime-runc
root     21752  0.0  0.0    204     4 ?        Ss   03:36   0:00  |   |   \_ s6-svscan -t0 /var/run/s6/services
root     21826  0.0  0.0    204     4 ?        S    03:36   0:00  |   |       \_ s6-supervise s6-fdholderd
root     22151  0.0  0.0    204     4 ?        S    03:36   0:00  |   |       \_ s6-supervise embystat
nobody   22159 93.3  0.3 22089576 90960 ?      SLsl 03:36 313:56  |   |           \_ /opt/embystat/EmbyStat --no-updates

  • Author
4 minutes ago, BRiT said:

It's your dockers. Look at your ps or top reports.

Gah! That makes perfect sense - I just installed EmbyStat a couple of days ago, and I guess it runs non-stop! Stopped the docker and CPU utilization dropped to normal. 

 

I've had radarr running for a while now - the occasional spike when it's scanning isn't a worry...

  • Author

The log seems to be getting spammed with tons of OOM errors like:

Jan 4 05:39:09 NAS nginx: 2020/01/04 05:39:09 [crit] 32725#32725: ngx_slab_alloc() failed: no memory
Jan 4 05:39:09 NAS nginx: 2020/01/04 05:39:09 [error] 32725#32725: shpool alloc failed
Jan 4 05:39:09 NAS nginx: 2020/01/04 05:39:09 [error] 32725#32725: nchan: Out of shared memory while allocating message of size 11260. Increase nchan_max_reserved_memory.
Jan 4 05:39:09 NAS nginx: 2020/01/04 05:39:09 [error] 32725#32725: *1720414 nchan: error publishing message (HTTP status code 500), client: unix:, server: , request: "POST /pub/disks?buffer_length=1 HTTP/1.1", host: "localhost"
Jan 4 05:39:09 NAS nginx: 2020/01/04 05:39:09 [error] 32725#32725: MEMSTORE:00: can't create shared message for channel /disks
Jan 4 05:39:10 NAS nginx: 2020/01/04 05:39:10 [crit] 32725#32725: ngx_slab_alloc() failed: no memory
Jan 4 05:39:10 NAS nginx: 2020/01/04 05:39:10 [error] 32725#32725: shpool alloc failed
Jan 4 05:39:10 NAS nginx: 2020/01/04 05:39:10 [error] 32725#32725: nchan: Out of shared memory while allocating message of size 11260. Increase nchan_max_reserved_memory.
Jan 4 05:39:10 NAS nginx: 2020/01/04 05:39:10 [error] 32725#32725: *1720418 nchan: error publishing message (HTTP status code 500), client: unix:, server: , request: "POST /pub/disks?buffer_length=1 HTTP/1.1", host: "localhost"

I notice those were at 05:39 this morning and it's currently 09:58, so it seems to have stopped 4 hours ago. Is that due to lack of space for logging (log files rotate, don't they) or did whatever was causing the OOM stop?

 

Where is the log located when the server is running - is this on the RAM disk? Can/should I clear the log, or will the older logs just rotate out, freeing up space? Do I need a reboot just to help things settle down? (scurries off to ensure EmbyStat is not set to auto-start!)

Those aren't OOM's in the "classic" sense.  It's more akin to a message being dropped in communication between your browser and the server when the UI is doing something like updating in real time the read/write rates on the drives, etc  From a functional point of view, no processes were killed off.

 

What was going on in your browsers during that time frame?  (I also couldn't easily find a reference in unRaid's GUI to that particular message system)

  • Author

I have a tenancy of leaving the main Unraid GUI open, as well as others for dockers I regularly use.

 

I suppose that's a bad habit, but I guess I'll need to break it... Other than the web GUI, none update regularly.

 

Sent from my moto g(7) using Tapatalk

 

 

 

 

Edited by FreeMan

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